Nucleosomes, histones & chromatin. Part B / edited by Carl Wu, C. David Allis.

Contributor(s): Wu, Carl | Allis, C. David
Material type: TextTextSeries: Methods in enzymology: v. 513.Publisher: Amsterdam ; Boston : Elsevier/Academic Press, 2012Edition: 1st edDescription: 1 online resource (li, 356 pages, 20 unnumbered pages of plates) : illustrations (some color)Content type: text Media type: computer Carrier type: online resourceISBN: 9780123919397; 0123919398Other title: Nucleosomes, histones and chromatinSubject(s): Nucleoproteins | Histones | Chromatin | SCIENCE -- Life Sciences -- Molecular Biology | Chromatin | Histones | Nucleoproteins | Nucleosomes | Chromatin | Histones | Chemistry Techniques, AnalyticalGenre/Form: Electronic books. | Electronic books. Additional physical formats: Print version:: Nucleosomes, histones & chromatin. Part B.DDC classification: 572.8 LOC classification: QP601 | .C57 v. 513ebOnline resources: Click here to access online
Contents:
DNA translocation of ATP-dependent chromatin remodeling factors revealed by high-resolution optical tweezers / Yongli Zhang [and others] -- Unzipping single DNA molecules to study nucleosome structure and dynamics / Ming Li and Michelle D. Wang -- Monitoring conformational dynamics with single-molecule fluorescence energy transfer : applications in nucleosome remodeling / Sebastian Deindl and Xiaowei Zhuang -- 4C technology : protocols and data analysis / Harmen J.G. van de Werken [and others] -- A torrent of data : mapping chromatin organization using 5C and high-throughput sequencing / James Fraser [and others] -- Genome-wide mapping of nucleosomes in yeast using paired-end sequencing / Hope A. Cole, Bruce H. Howard, and David J. Clark -- Measuring genome-wide nucleosome turnover using CATCH-IT / Sheila S. Teves, Roger B. Deal, and Steven Henikoff -- DNA methyltransferase accessibility protocol for individual templates by deep sequencing / Russell P. Darst [and others] -- Genome-wide in vitro reconstitution of yeast chromatin with in vivo-like nucleosome positioning / Nils Krietenstein [and others] -- Genome-wide mapping of nucleosome positions in yeast using high-resolution MNase ChIP-Seq / Megha Wal and B. Franklin Pugh -- Preparation of Drosophila tissue culture cells from different stages of the cell cycle for chromatin immunoprecipitation using centrifugal counterflow elutriation and fluorescence-activated cell sorting / Nicole E. Follmer and Nicole J. Francis -- Genome-wide polyadenylation site mapping / Vicent Pelechano [and others] -- Genome-wide mapping of nucleosome occupancy, histone modifications, and gene expression using next-generation sequencing technology / Gang Wei [and others] -- A chemical approach to mapping nucleosomes at base pair resolution in yeast / Kristin R. Brogaard [and others].
Summary: Covers nucleosomes, histones and chromatin, with chapters on dynamic mapping of histone-DNA interactions in nucleosomes by unzipping single molecules of DNA, Digital DNase technology, and Genome-wide Analysis of Chromatin Transition.
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Includes bibliographical references and indexes.

DNA translocation of ATP-dependent chromatin remodeling factors revealed by high-resolution optical tweezers / Yongli Zhang [and others] -- Unzipping single DNA molecules to study nucleosome structure and dynamics / Ming Li and Michelle D. Wang -- Monitoring conformational dynamics with single-molecule fluorescence energy transfer : applications in nucleosome remodeling / Sebastian Deindl and Xiaowei Zhuang -- 4C technology : protocols and data analysis / Harmen J.G. van de Werken [and others] -- A torrent of data : mapping chromatin organization using 5C and high-throughput sequencing / James Fraser [and others] -- Genome-wide mapping of nucleosomes in yeast using paired-end sequencing / Hope A. Cole, Bruce H. Howard, and David J. Clark -- Measuring genome-wide nucleosome turnover using CATCH-IT / Sheila S. Teves, Roger B. Deal, and Steven Henikoff -- DNA methyltransferase accessibility protocol for individual templates by deep sequencing / Russell P. Darst [and others] -- Genome-wide in vitro reconstitution of yeast chromatin with in vivo-like nucleosome positioning / Nils Krietenstein [and others] -- Genome-wide mapping of nucleosome positions in yeast using high-resolution MNase ChIP-Seq / Megha Wal and B. Franklin Pugh -- Preparation of Drosophila tissue culture cells from different stages of the cell cycle for chromatin immunoprecipitation using centrifugal counterflow elutriation and fluorescence-activated cell sorting / Nicole E. Follmer and Nicole J. Francis -- Genome-wide polyadenylation site mapping / Vicent Pelechano [and others] -- Genome-wide mapping of nucleosome occupancy, histone modifications, and gene expression using next-generation sequencing technology / Gang Wei [and others] -- A chemical approach to mapping nucleosomes at base pair resolution in yeast / Kristin R. Brogaard [and others].

Covers nucleosomes, histones and chromatin, with chapters on dynamic mapping of histone-DNA interactions in nucleosomes by unzipping single molecules of DNA, Digital DNase technology, and Genome-wide Analysis of Chromatin Transition.

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