Computational methods for SNPs and haplotype inference : DIMACS/RECOMB satellite workshop, Piscataway, NJ, USA, November 21-22, 2002 : revised papers / Sorin Istrail, Michael Waterman, Andrew Clark, (eds.).

By: (1st : Computational Methods for SNPs and Haplotype Inference Workshop (1st : 2002 : Piscataway, N.J.)
Contributor(s): Istrail, Sorin | Waterman, Michael S | Clark, Andrew G, 1954-
Material type: TextTextSeries: SerienbezeichnungLecture notes in computer science: 2983.; Lecture notes in computer science: Publisher: Berlin ; New York : Springer-Verlag, ©2004Description: 1 online resource (ix, 152 pages) : illustrationsContent type: text Media type: computer Carrier type: online resourceISBN: 354024719X; 9783540247197; 1280307099; 9781280307096; 9786610307098; 6610307091Other title: DIMACS/RECOMB satellite workshopSubject(s): Molecular genetics -- Mathematics -- Congresses | Single nucleotide polymorphisms -- Congresses | Nucleotide sequence -- Congresses | Medical genetics -- Congresses | Computational biology -- Congresses | SCIENCE -- Life Sciences -- Molecular Biology | Computational biology | Medical genetics | Molecular genetics -- Mathematics | Nucleotide sequence | Single nucleotide polymorphisms | Haplotyp | SNP | Piscataway (NJ, 2002) | computational methods | SNPs | haplotype inference | DIMACS | RECOMB | single nucleotide polymorphismsGenre/Form: Electronic books. | Conference papers and proceedings. | Kongress. Additional physical formats: Print version:: Computational methods for SNPs and haplotype inference.DDC classification: 572.8/01/51 LOC classification: QH438.4.M33 | C65 2002Other classification: 06.64 | 42.11 | 54.74 | SS 4800 | BIO 110f | BIO 180f | DAT 620f | DAT 825f Online resources: Click here to access online
Contents:
Trisomic phase inference / A.G. Clark, E.T. Dermitzakis, S.E. Antonarakis -- An overview of combinatorial methods for haplotype inference / D. Gusfield -- A survey of computational methods for determining haplotypes / B.V. Halldorsson [and others] -- Haplotype inference and its application in linkage disequilibrium mapping / T. Niu [and others] -- Inferring piecewise ancestral history from haploid sequences / R. Schwartz, A.G. Clark, S. Istrail -- Haplotype blocks in small populations / E.A. Thompson, N.H. Chapman -- Simulating a coalescent process with recombination and ascertainment / Y. Wang, B. Rannala -- Dynamic programming algorithms for haplotype block partitioning and tag SNP selection using haplotype data or genotype data / K. Zhang [and others] -- Parametric bootstrap for assessment of goodness of fit of models for block haplotype structure / M. Zheng, M.S. McPeek -- A coalescent-based approach for complex disease mapping / S. Zollner, J.K. Pritchard -- Haplotyping as perfect phylogeny / V. Bafna [and others] -- Exhaustive enumeration and Bayesian phase inference / A. Clark -- How does choice of polymorphism influence estimation of LD and mapping? / N. Cox -- Haplotype inference in random population samples / D. Cutler -- Bayesian methods for statistical reconstruction of haplotypes / P. Donnelly -- Combinatorial approaches to haplotype inference / D. Gusfield -- Large scale recovery of haplotypes from genotype data using imperfect phylogeny / E. Halperin -- Haplotype inference and haplotype information / J. Liu -- Multi-locus linkage disequilibrium and haplotype-based tests of association / D. Nielsen -- The pattern of polymorphism on human chromosome / M. Nordborg -- Use of a local approximation to the ancestral recombination graph for fine mapping disease genes / J. Pritchard, S. Zollner -- Insights into recombination from patterns of linkage disequilibrium / M. Przeworski -- Joint Bayesian estimation of mutation location and age using linkage disequilibrium / B. Rannala -- Evolutionary-based association analysis using haplotype data / K. Roeder -- Inferring piecewise ancestral history from haploid sequences / R. Schwartz -- Testing for differences in haplotype frequencies in case-control studies / M. Slatkin -- Haplotypes, hotspots, and a multilocus model for linkage disequilibrium / M. Stephens -- Dynamic programming algorithms for haplotype block partition and applications to association studies / F. Sun -- Genome sharing in small populations / E. Thompson -- Patterns of linkage disequilibrium across human chromosomes / F. de la Vega -- A software system for automated and visual analysis of functionally annotated haplotypes / J. Zhang -- Assessment of goodness of fit of models for block haplotype structure / M. Zheng, M.S. McPeek.
Summary: This book constitutes the post-proceedings of the DIMACS/RECOMB Satellite Workshop on Computational Methods for SNPs and Haplotype Inference held in Piscataway, NJ, USA, in November 2002. The book presents ten revised full papers as well as abstracts of the remaining workshop papers. All relevant current issues in computational methods for SNP and haplotype analysis and their applications to disease associations are addressed.
Tags from this library: No tags from this library for this title. Log in to add tags.
    Average rating: 0.0 (0 votes)
Item type Current location Collection Call number Status Date due Barcode Item holds
eBook eBook e-Library

Electronic Book@IST

EBook Available
Total holds: 0

Includes bibliographical references and author index.

Trisomic phase inference / A.G. Clark, E.T. Dermitzakis, S.E. Antonarakis -- An overview of combinatorial methods for haplotype inference / D. Gusfield -- A survey of computational methods for determining haplotypes / B.V. Halldorsson [and others] -- Haplotype inference and its application in linkage disequilibrium mapping / T. Niu [and others] -- Inferring piecewise ancestral history from haploid sequences / R. Schwartz, A.G. Clark, S. Istrail -- Haplotype blocks in small populations / E.A. Thompson, N.H. Chapman -- Simulating a coalescent process with recombination and ascertainment / Y. Wang, B. Rannala -- Dynamic programming algorithms for haplotype block partitioning and tag SNP selection using haplotype data or genotype data / K. Zhang [and others] -- Parametric bootstrap for assessment of goodness of fit of models for block haplotype structure / M. Zheng, M.S. McPeek -- A coalescent-based approach for complex disease mapping / S. Zollner, J.K. Pritchard -- Haplotyping as perfect phylogeny / V. Bafna [and others] -- Exhaustive enumeration and Bayesian phase inference / A. Clark -- How does choice of polymorphism influence estimation of LD and mapping? / N. Cox -- Haplotype inference in random population samples / D. Cutler -- Bayesian methods for statistical reconstruction of haplotypes / P. Donnelly -- Combinatorial approaches to haplotype inference / D. Gusfield -- Large scale recovery of haplotypes from genotype data using imperfect phylogeny / E. Halperin -- Haplotype inference and haplotype information / J. Liu -- Multi-locus linkage disequilibrium and haplotype-based tests of association / D. Nielsen -- The pattern of polymorphism on human chromosome / M. Nordborg -- Use of a local approximation to the ancestral recombination graph for fine mapping disease genes / J. Pritchard, S. Zollner -- Insights into recombination from patterns of linkage disequilibrium / M. Przeworski -- Joint Bayesian estimation of mutation location and age using linkage disequilibrium / B. Rannala -- Evolutionary-based association analysis using haplotype data / K. Roeder -- Inferring piecewise ancestral history from haploid sequences / R. Schwartz -- Testing for differences in haplotype frequencies in case-control studies / M. Slatkin -- Haplotypes, hotspots, and a multilocus model for linkage disequilibrium / M. Stephens -- Dynamic programming algorithms for haplotype block partition and applications to association studies / F. Sun -- Genome sharing in small populations / E. Thompson -- Patterns of linkage disequilibrium across human chromosomes / F. de la Vega -- A software system for automated and visual analysis of functionally annotated haplotypes / J. Zhang -- Assessment of goodness of fit of models for block haplotype structure / M. Zheng, M.S. McPeek.

This book constitutes the post-proceedings of the DIMACS/RECOMB Satellite Workshop on Computational Methods for SNPs and Haplotype Inference held in Piscataway, NJ, USA, in November 2002. The book presents ten revised full papers as well as abstracts of the remaining workshop papers. All relevant current issues in computational methods for SNP and haplotype analysis and their applications to disease associations are addressed.

Print version record.

There are no comments for this item.

to post a comment.

Powered by Koha