Formal methods for computational systems biology : 8th International School on Formal Methods for the Design of Computer, Communication, and Software Systems, SFM 2008, Bertinoro, Italy, June 2-7, 2008 : advanced lectures / Marco Bernardo, Pierpaolo Degano, Gianluigi Zavattaro (eds.).

By: (8th : International School on Formal Methods for the Design of Computer, Communication, and Software Systems (8th : 2008 : Bertinoro, Italy)
Contributor(s): Bernardo, Marco | Degano, Pierpaolo, 1950- | Zavattaro, Gianluigi
Material type: TextTextSeries: SerienbezeichnungLecture notes in computer science: 5016.; LNCS sublibrary: ; Lecture notes in computer science: Publisher: Berlin ; New York : Springer, 2008Description: 1 online resource (x, 523 pages) : illustrationsContent type: text Media type: computer Carrier type: online resourceISBN: 9783540688945; 3540688943; 9783540688921; 3540688927Other title: SFM 2008Subject(s): Formal methods (Computer science) -- Congresses | Integrated circuits -- Verification -- Congresses | Formal methods (Computer science) | Integrated circuits -- Verification | Informatique | Formal methods (Computer science) | Integrated circuits -- VerificationGenre/Form: Electronic books. | Conference papers and proceedings. Additional physical formats: Print version:: Formal methods for computational systems biology.DDC classification: 004 LOC classification: QA76.9.F67 | I586 2008ebOther classification: TP301-532 Online resources: Click here to access online
Contents:
Regular Lectures -- Sensitivity Analysis of Stochastic Models of Bistable Biochemical Reactions -- Pathway Logic -- Formal Cell Biology in Biocham -- Hierarchical Modeling for Computational Biology -- Simulation Methods in Systems Biology -- Membrane Computing as a Modeling Framework. Cellular Systems Case Studies -- Petri Nets for Systems and Synthetic Biology -- Process Algebras in Systems Biology -- The BlenX Language: A Tutorial -- BISCA Talks -- Cells in Silico: A Holistic Approach -- The Calculus of Looping Sequences -- Hybrid Systems and Biology --?@: A?-Based Process Calculus for the Implementation of Compartmentalised Bio-inspired Calculi -- A Gentle Introduction to Stochastic (Poly)Automata Collectives and the (Bio)Chemical Ground Form.
Summary: This book presents a set of 14 papers accompanying the lectures of leading researchers given at the 8th edition of the International School on Formal Methods for the Design of Computer, Communication and Software Systems, SFM 2008, held in Bertinoro, Italy in June 2008. SFM 2008 was devoted to formal techniques for computational systems biology and covered several aspects of the field, including computational models, calculi and logics for biological systems, and verification and simulation methods. The first part of this volume comprises nine papers based on regular lectures, the second part of this volume comprises five papers based on talks given by people involved in the Italian BISCA research project on Bio-Inspired Systems and Calculi with Applications.
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Includes bibliographical references and index.

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Regular Lectures -- Sensitivity Analysis of Stochastic Models of Bistable Biochemical Reactions -- Pathway Logic -- Formal Cell Biology in Biocham -- Hierarchical Modeling for Computational Biology -- Simulation Methods in Systems Biology -- Membrane Computing as a Modeling Framework. Cellular Systems Case Studies -- Petri Nets for Systems and Synthetic Biology -- Process Algebras in Systems Biology -- The BlenX Language: A Tutorial -- BISCA Talks -- Cells in Silico: A Holistic Approach -- The Calculus of Looping Sequences -- Hybrid Systems and Biology --?@: A?-Based Process Calculus for the Implementation of Compartmentalised Bio-inspired Calculi -- A Gentle Introduction to Stochastic (Poly)Automata Collectives and the (Bio)Chemical Ground Form.

This book presents a set of 14 papers accompanying the lectures of leading researchers given at the 8th edition of the International School on Formal Methods for the Design of Computer, Communication and Software Systems, SFM 2008, held in Bertinoro, Italy in June 2008. SFM 2008 was devoted to formal techniques for computational systems biology and covered several aspects of the field, including computational models, calculi and logics for biological systems, and verification and simulation methods. The first part of this volume comprises nine papers based on regular lectures, the second part of this volume comprises five papers based on talks given by people involved in the Italian BISCA research project on Bio-Inspired Systems and Calculi with Applications.

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