Applied parallel and scientific computing : 11th International Conference, PARA 2012, Helsinki, Finland, June 10-13, 2012, Revised selected papers / Pekka Manninen, Per Öster (eds.).

By: (11th : PARA (Conference) (11th : 2012 : Helsinki, Finland)
Contributor(s): Manninen, Pekka (Computer scientist) [edt] | Öster, Per [edt]
Material type: TextTextSeries: SerienbezeichnungLecture notes in computer science: 7782.; LNCS sublibrary: Publisher: Berlin ; New York : Springer, ©2013Description: 1 online resourceContent type: text Media type: computer Carrier type: online resourceISBN: 9783642368035; 3642368034; 3642368026; 9783642368028Other title: PARA 2012Subject(s): Parallel processing (Electronic computers) -- Congresses | Parallel computers -- Congresses | Computers | Software | Parallel computers | Parallel processing (Electronic computers) | Computer science | Computer system performance | Computer software | Electronic data processing | Numeric Computing | Processor Architectures | System Performance and Evaluation | computerwetenschappen | computer sciences | numerieke methoden | numerical methods | computertechnieken | computer techniques | wiskunde | mathematics | algoritmen | algorithms | computeranalyse | computer analysis | systeemanalyse | systems analysis | procesarchitectuur | process architecture | Information and Communication Technology (General) | Informatie- en communicatietechnologie (algemeen)Genre/Form: Congress. | Electronic books. | Conference papers and proceedings. | Computer software. Additional physical formats: Printed edition:: No titleDDC classification: 004.6/185 LOC classification: QA76.58 | .P37 2012Other classification: 54.51 Online resources: Click here to access online
Contents:
Overview Articles of Topical Minisymposia -- Computational Physics on Graphics Processing Units / Ari Harju, Topi Siro, Filippo Federici Canova, Samuli Hakala, Teemu Rantalaiho -- Preparing Scientific Application Software for Exascale Computing / J.A. Åström, A. Carter, J. Hetherington, K. Ioakimidis, E. Lindahl, G. Mozdzynski -- PRACE DECI (Distributed European Computing Initiative) Minisymposium / Chris Johnson, Adam Carter, Iain Bethune, Kevin Statford, Mikko Alava, Vitor Cardoso -- Advances in HPC Applications -- Parallel Electronic Structure Calculations Using Multiple Graphics Processing Units (GPUs) / Samuli Hakala, Ville Havu, Jussi Enkovaara, Risto Nieminen -- An Environment for Service Composition, Execution and Resource Allocation / Jan Kwiatkowski, Krzysztof Juszczyszyn, Grzegorz Kolaczek -- Multicore and Accelerator Development for a Leadership-Class Stellar Astrophysics Code / O.E. Bronson Messer, J. Austin Harris, Suzanne Parete-Koon, Merek A. Chertkow.
Steering and In-situ Visualization for Simulation of Seismic Wave Propagation on Graphics Cards / David Michéa, Joachim Pouderoux, Fabrice Dupros, Hideo Aochi -- PCJ -- New Approach for Parallel Computations in Java / Marek Nowicki, Piotr Bała -- Porting Production Level Quantum Chromodynamics Code to Graphics Processing Units -- A Case Study / Teemu Rantalaiho -- Time Propagation of Many-Body Quantum States on Graphics Processing Units / Topi Siro, Ari Harju -- Parallel Numerical Simulation of Seismic Waves Propagation with Intel Math Kernel Library / Mikhail A. Belonosov, Clement Kostov, Galina V. Reshetova, Sergey A. Soloviev -- Parallel Algorithms -- Blocked Schur Algorithms for Computing the Matrix Square Root / Edvin Deadman, Nicholas J. Higham, Rui Ralha -- Distributed Evolutionary Computing System Based on Web Browsers with JavaScript / Jerzy Duda, Wojciech Dłubacz -- Use of Direct Solvers in TFETI Massively Parallel Implementation / Václav Hapla, David Horák, Michal Merta.
Parallel Implementation of the Sherman-Morrison Matrix Inverse Algorithm / Xin He, Marcus Holm, Maya Neytcheva -- Multi-threaded Nested Filtering Factorization Preconditioner / Pawan Kumar, Karl Meerbergen, Dirk Roose -- An Approach of the QR Factorization for Tall-and-Skinny Matrices on Multicore Platforms / Sergey V. Kuznetsov -- Approximate Incomplete Cyclic Reduction for Systems Which Are Tridiagonal and Strictly Diagonally Dominant by Rows / Carl Christian Kjelgaard Mikkelsen, Bo Kågström -- Fast Poisson Solvers for Graphics Processing Units / Mirko Myllykoski, Tuomo Rossi, Jari Toivanen -- Parallel Feature Selection for Regularized Least-Squares / Sebastian Okser, Antti Airola, Tero Aittokallio, Tapio Salakoski, Tapio Pahikkala -- Topology Aware Process Mapping / Sebastian von Alfthan, Ilja Honkonen, Minna Palmroth -- Numprof: A Performance Analysis Framework for Numerical Libraries / Olli-Pekka Lehto -- Multi-core Scalability Measurements: Issues and Solutions / Mattias Linde.
AutoTune: A Plugin-Driven Approach to the Automatic Tuning of Parallel Applications / Renato Miceli, Gilles Civario, Anna Sikora, Eduardo César, Michael Gerndt -- Vectorized Higher Order Finite Difference Kernels / Gerhard Zumbusch -- Applications of Parallel Computing in Industry and Engineering -- Preconditioning for Large Scale Micro Finite Element Analyses of 3D Poroelasticity / Peter Arbenz, Erhan Turan -- Parallel Solvers for Numerical Upscaling / R. Blaheta, O. Jakl, J. Starý, Erhan Turan -- Parallel Numerical Algorithms for Simulation of Multidimensional Ill-Posed Nonlinear Diffusion-Advection-Reaction Models / Raimondas Čiegis, Andrej Bugajev -- Efficient Setup of Aggregation AMG for CFD on GPUs / Maximilian Emans, Manfred Liebmann -- Accelerating 2D-to-3D Video Conversion on Multi-core Systems / Jiangbin Feng, Yurong Chen, Eric Li, Yangzhou Du, Yimin Zhang -- Solution of Multi-Objective Competitive Facility Location Problems Using Parallel NSGA-II on Large Scale Computing Systems / Algirdas Lančinskas, Julius Żilinskas.
Simulation Software for Flow of Fluid with Suspended Point Particles in Complex Domains: Application to Matrix Diffusion / Jukka I. Toivanen, Keijo Mattila, Jari Hyväluoma, Pekka Kekäläinen, Tuomas Puurtinen -- HPC Interval Methods -- Introduction to the "HPC Interval Methods" Minisymposium / Bartłomiej Jacek Kubica -- Parallel Interval Newton Method on CUDA / Philip-Daniel Beck, Marco Nehmeier -- Heterogeneous Multi-agent Evolutionary System for Solving Parametric Interval Linear Systems / Jerzy Duda, Iwona Skalna -- Interval Finite Difference Method for Solving the One-Dimensional Heat Conduction Problem with Heat Sources / Malgorzata A. Jankowska, Grazyna Sypniewska-Kaminska -- Interval Arithmetic and Automatic Differentiation on GPU Using OpenCL / Grzegorz Kozikowski, Bartłomiej Jacek Kubica -- Tuning the Interval Algorithm for Seeking Pareto Sets of Multi-criteria Problems / Bartłomiej Jacek Kubica, Adam Woźniak.
A Central-Backward Difference Interval Method for Solving the Wave Equation / Andrzej Marciniak, Barbara Szyszka -- Collection of Extended Abstracts -- Using State-of-the-Art Sparse Matrix Optimizations for Accelerating the Performance of Multiphysics Simulations / Vasileios Karakasis, Georgios Goumas, Konstantinos Nikas, Nectarios Koziris -- Topology Aware Process Mapping / Sebastian von Alfthan, Ilja Honkonen, Minna Palmroth -- Numprof: A Performance Analysis Framework for Numerical Libraries / Olli-Pekka Lehto -- Multi-core Scalability Measurements: Issues and Solutions / Mattias Linde -- AutoTune: A Plugin-Driven Approach to the Automatic Tuning of Parallel Applications / Renato Miceli, Gilles Civario, Anna Sikora, Eduardo César, Michael Gerndt -- Vectorized Higher Order Finite Difference Kernels / Gerhard Zumbusch -- Applications of Parallel Computing in Industry and Engineering -- Preconditioning for Large Scale Micro Finite Element Analyses of 3D Poroelasticity / Peter Arbenz, Erhan Turan.
Parallel Solvers for Numerical Upscaling / R. Blaheta, O. Jakl, J. Starý, Erhan Turan -- Parallel Numerical Algorithms for Simulation of Multidimensional Ill-Posed Nonlinear Diffusion-Advection-Reaction Models / Raimondas Čiegis, Andrej Bugajev -- Efficient Setup of Aggregation AMG for CFD on GPUs / Maximilian Emans, Manfred Liebmann -- Accelerating 2D-to-3D Video Conversion on Multi-core Systems / Jiangbin Feng, Yurong Chen, Eric Li, Yangzhou Du, Yimin Zhang -- Solution of Multi-Objective Competitive Facility Location Problems Using Parallel NSGA-II on Large Scale Computing Systems / Algirdas Lančinskas, Julius Żilinskas -- Simulation Software for Flow of Fluid with Suspended Point Particles in Complex Domains: Application to Matrix Diffusion / Jukka I. Toivanen, Keijo Mattila, Jari Hyväluoma, Pekka Kekäläinen, Tuomas Puurtinen -- HPC Interval Methods -- Introduction to the "HPC Interval Methods" Minisymposium / Bartłomiej Jacek Kubica -- Parallel Interval Newton Method on CUDA / Philip-Daniel Beck, Marco Nehmeier.
Heterogeneous Multi-agent Evolutionary System for Solving Parametric Interval Linear Systems / Jerzy Duda, Iwona Skalna -- Interval Finite Difference Method for Solving the One-Dimensional Heat Conduction Problem with Heat Sources / Malgorzata A. Jankowska, Grazyna Sypniewska-Kaminska -- Interval Arithmetic and Automatic Differentiation on GPU Using OpenCL / Grzegorz Kozikowski, Bartłomiej Jacek Kubica -- Tuning the Interval Algorithm for Seeking Pareto Sets of Multi-criteria Problems / Bartłomiej Jacek Kubica, Adam Woźniak -- A Central-Backward Difference Interval Method for Solving the Wave Equation / Andrzej Marciniak, Barbara Szyszka -- Collection of Extended Abstracts -- Using State-of-the-Art Sparse Matrix Optimizations for Accelerating the Performance of Multiphysics Simulations / Vasileios Karakasis, Georgios Goumas, Konstantinos Nikas, Nectarios Koziris.
Summary: This volume constitutes the refereed proceedings of the 11th International Conference on Applied Parallel and Scientific Computing, PARA 2012, held in Helsinki, Finland, in June 2012. The 35 revised full papers presented were selected from numerous submissions and are organized in five technical sessions covering the topics of advances in HPC applications, parallel algorithms, performance analyses and optimization, application of parallel computing in industry and engineering, and HPC interval methods. In addition, three of the topical minisymposia are described by a corresponding overview article on the minisympoisa topic. In order to cover the state-of-the-art of the field, at the end of the book a set of abstracts describe some of the conference talks not elaborated into full articles.
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Overview Articles of Topical Minisymposia -- Computational Physics on Graphics Processing Units / Ari Harju, Topi Siro, Filippo Federici Canova, Samuli Hakala, Teemu Rantalaiho -- Preparing Scientific Application Software for Exascale Computing / J.A. Åström, A. Carter, J. Hetherington, K. Ioakimidis, E. Lindahl, G. Mozdzynski -- PRACE DECI (Distributed European Computing Initiative) Minisymposium / Chris Johnson, Adam Carter, Iain Bethune, Kevin Statford, Mikko Alava, Vitor Cardoso -- Advances in HPC Applications -- Parallel Electronic Structure Calculations Using Multiple Graphics Processing Units (GPUs) / Samuli Hakala, Ville Havu, Jussi Enkovaara, Risto Nieminen -- An Environment for Service Composition, Execution and Resource Allocation / Jan Kwiatkowski, Krzysztof Juszczyszyn, Grzegorz Kolaczek -- Multicore and Accelerator Development for a Leadership-Class Stellar Astrophysics Code / O.E. Bronson Messer, J. Austin Harris, Suzanne Parete-Koon, Merek A. Chertkow.

Steering and In-situ Visualization for Simulation of Seismic Wave Propagation on Graphics Cards / David Michéa, Joachim Pouderoux, Fabrice Dupros, Hideo Aochi -- PCJ -- New Approach for Parallel Computations in Java / Marek Nowicki, Piotr Bała -- Porting Production Level Quantum Chromodynamics Code to Graphics Processing Units -- A Case Study / Teemu Rantalaiho -- Time Propagation of Many-Body Quantum States on Graphics Processing Units / Topi Siro, Ari Harju -- Parallel Numerical Simulation of Seismic Waves Propagation with Intel Math Kernel Library / Mikhail A. Belonosov, Clement Kostov, Galina V. Reshetova, Sergey A. Soloviev -- Parallel Algorithms -- Blocked Schur Algorithms for Computing the Matrix Square Root / Edvin Deadman, Nicholas J. Higham, Rui Ralha -- Distributed Evolutionary Computing System Based on Web Browsers with JavaScript / Jerzy Duda, Wojciech Dłubacz -- Use of Direct Solvers in TFETI Massively Parallel Implementation / Václav Hapla, David Horák, Michal Merta.

Parallel Implementation of the Sherman-Morrison Matrix Inverse Algorithm / Xin He, Marcus Holm, Maya Neytcheva -- Multi-threaded Nested Filtering Factorization Preconditioner / Pawan Kumar, Karl Meerbergen, Dirk Roose -- An Approach of the QR Factorization for Tall-and-Skinny Matrices on Multicore Platforms / Sergey V. Kuznetsov -- Approximate Incomplete Cyclic Reduction for Systems Which Are Tridiagonal and Strictly Diagonally Dominant by Rows / Carl Christian Kjelgaard Mikkelsen, Bo Kågström -- Fast Poisson Solvers for Graphics Processing Units / Mirko Myllykoski, Tuomo Rossi, Jari Toivanen -- Parallel Feature Selection for Regularized Least-Squares / Sebastian Okser, Antti Airola, Tero Aittokallio, Tapio Salakoski, Tapio Pahikkala -- Topology Aware Process Mapping / Sebastian von Alfthan, Ilja Honkonen, Minna Palmroth -- Numprof: A Performance Analysis Framework for Numerical Libraries / Olli-Pekka Lehto -- Multi-core Scalability Measurements: Issues and Solutions / Mattias Linde.

AutoTune: A Plugin-Driven Approach to the Automatic Tuning of Parallel Applications / Renato Miceli, Gilles Civario, Anna Sikora, Eduardo César, Michael Gerndt -- Vectorized Higher Order Finite Difference Kernels / Gerhard Zumbusch -- Applications of Parallel Computing in Industry and Engineering -- Preconditioning for Large Scale Micro Finite Element Analyses of 3D Poroelasticity / Peter Arbenz, Erhan Turan -- Parallel Solvers for Numerical Upscaling / R. Blaheta, O. Jakl, J. Starý, Erhan Turan -- Parallel Numerical Algorithms for Simulation of Multidimensional Ill-Posed Nonlinear Diffusion-Advection-Reaction Models / Raimondas Čiegis, Andrej Bugajev -- Efficient Setup of Aggregation AMG for CFD on GPUs / Maximilian Emans, Manfred Liebmann -- Accelerating 2D-to-3D Video Conversion on Multi-core Systems / Jiangbin Feng, Yurong Chen, Eric Li, Yangzhou Du, Yimin Zhang -- Solution of Multi-Objective Competitive Facility Location Problems Using Parallel NSGA-II on Large Scale Computing Systems / Algirdas Lančinskas, Julius Żilinskas.

Simulation Software for Flow of Fluid with Suspended Point Particles in Complex Domains: Application to Matrix Diffusion / Jukka I. Toivanen, Keijo Mattila, Jari Hyväluoma, Pekka Kekäläinen, Tuomas Puurtinen -- HPC Interval Methods -- Introduction to the "HPC Interval Methods" Minisymposium / Bartłomiej Jacek Kubica -- Parallel Interval Newton Method on CUDA / Philip-Daniel Beck, Marco Nehmeier -- Heterogeneous Multi-agent Evolutionary System for Solving Parametric Interval Linear Systems / Jerzy Duda, Iwona Skalna -- Interval Finite Difference Method for Solving the One-Dimensional Heat Conduction Problem with Heat Sources / Malgorzata A. Jankowska, Grazyna Sypniewska-Kaminska -- Interval Arithmetic and Automatic Differentiation on GPU Using OpenCL / Grzegorz Kozikowski, Bartłomiej Jacek Kubica -- Tuning the Interval Algorithm for Seeking Pareto Sets of Multi-criteria Problems / Bartłomiej Jacek Kubica, Adam Woźniak.

A Central-Backward Difference Interval Method for Solving the Wave Equation / Andrzej Marciniak, Barbara Szyszka -- Collection of Extended Abstracts -- Using State-of-the-Art Sparse Matrix Optimizations for Accelerating the Performance of Multiphysics Simulations / Vasileios Karakasis, Georgios Goumas, Konstantinos Nikas, Nectarios Koziris -- Topology Aware Process Mapping / Sebastian von Alfthan, Ilja Honkonen, Minna Palmroth -- Numprof: A Performance Analysis Framework for Numerical Libraries / Olli-Pekka Lehto -- Multi-core Scalability Measurements: Issues and Solutions / Mattias Linde -- AutoTune: A Plugin-Driven Approach to the Automatic Tuning of Parallel Applications / Renato Miceli, Gilles Civario, Anna Sikora, Eduardo César, Michael Gerndt -- Vectorized Higher Order Finite Difference Kernels / Gerhard Zumbusch -- Applications of Parallel Computing in Industry and Engineering -- Preconditioning for Large Scale Micro Finite Element Analyses of 3D Poroelasticity / Peter Arbenz, Erhan Turan.

Parallel Solvers for Numerical Upscaling / R. Blaheta, O. Jakl, J. Starý, Erhan Turan -- Parallel Numerical Algorithms for Simulation of Multidimensional Ill-Posed Nonlinear Diffusion-Advection-Reaction Models / Raimondas Čiegis, Andrej Bugajev -- Efficient Setup of Aggregation AMG for CFD on GPUs / Maximilian Emans, Manfred Liebmann -- Accelerating 2D-to-3D Video Conversion on Multi-core Systems / Jiangbin Feng, Yurong Chen, Eric Li, Yangzhou Du, Yimin Zhang -- Solution of Multi-Objective Competitive Facility Location Problems Using Parallel NSGA-II on Large Scale Computing Systems / Algirdas Lančinskas, Julius Żilinskas -- Simulation Software for Flow of Fluid with Suspended Point Particles in Complex Domains: Application to Matrix Diffusion / Jukka I. Toivanen, Keijo Mattila, Jari Hyväluoma, Pekka Kekäläinen, Tuomas Puurtinen -- HPC Interval Methods -- Introduction to the "HPC Interval Methods" Minisymposium / Bartłomiej Jacek Kubica -- Parallel Interval Newton Method on CUDA / Philip-Daniel Beck, Marco Nehmeier.

Heterogeneous Multi-agent Evolutionary System for Solving Parametric Interval Linear Systems / Jerzy Duda, Iwona Skalna -- Interval Finite Difference Method for Solving the One-Dimensional Heat Conduction Problem with Heat Sources / Malgorzata A. Jankowska, Grazyna Sypniewska-Kaminska -- Interval Arithmetic and Automatic Differentiation on GPU Using OpenCL / Grzegorz Kozikowski, Bartłomiej Jacek Kubica -- Tuning the Interval Algorithm for Seeking Pareto Sets of Multi-criteria Problems / Bartłomiej Jacek Kubica, Adam Woźniak -- A Central-Backward Difference Interval Method for Solving the Wave Equation / Andrzej Marciniak, Barbara Szyszka -- Collection of Extended Abstracts -- Using State-of-the-Art Sparse Matrix Optimizations for Accelerating the Performance of Multiphysics Simulations / Vasileios Karakasis, Georgios Goumas, Konstantinos Nikas, Nectarios Koziris.

This volume constitutes the refereed proceedings of the 11th International Conference on Applied Parallel and Scientific Computing, PARA 2012, held in Helsinki, Finland, in June 2012. The 35 revised full papers presented were selected from numerous submissions and are organized in five technical sessions covering the topics of advances in HPC applications, parallel algorithms, performance analyses and optimization, application of parallel computing in industry and engineering, and HPC interval methods. In addition, three of the topical minisymposia are described by a corresponding overview article on the minisympoisa topic. In order to cover the state-of-the-art of the field, at the end of the book a set of abstracts describe some of the conference talks not elaborated into full articles.

Includes author index.

English.

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