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Phylogenomics / edited by William J. Murphy.

Contributor(s): Murphy, William J., Ph. DMaterial type: TextTextSeries: Methods in molecular biology (Clifton, N.J.) ; v. 422.Publication details: Totowa, N.J. : Humana Press, ©2008. Description: 1 online resource (x, 259 pages) : illustrationsContent type: text Media type: computer Carrier type: online resourceISBN: 9781597455817; 1597455814Subject(s): Phylogeny | Genomics | Cytogenetics | Phylogeny | Molecular Biology | Genomics | Genetics | Biochemistry | Computational Biology | Genetic Phenomena | Biological Evolution | Classification | Information Science | Biological Science Disciplines | Biology | Biological Phenomena | Phenomena and Processes | Chemistry | Natural Science Disciplines | Disciplines and Occupations | Phylogenèse | Génomique | Genomics | Phylogeny | Phylogenie | Genanalyse | fylogenetica | phylogenetics | fylogenie | phylogeny | cytogenetica | cytogenetics | bacterial artificial chromosomes | chromosomen | chromosomes | evolutie | evolution | genomen | genomes | biologische technieken | biological techniques | genexpressieanalyse | genomics | protocollen | protocols | Genome informatics | GenoominformaticaGenre/Form: Laboratory Manual | Aufsatzsammlung. Additional physical formats: Print version:: Phylogenomics.DDC classification: 576.8/8 LOC classification: QH367.5 | .P49 2008NLM classification: W1 | QU 58.5Other classification: WH 2600 | BIO 175f | CHE 885f | CHE 808f Online resources: Click here to access online
Contents:
From gene-scale to genome-scale phylogenetics : the data flood in, but the challenges remain / Antonis Rokas and Stylianos Chatzimanolis -- Phylogenomic analysis of chromosome sorting and painting / Roscoe Stanyon and Gary Stone -- FISH for mapping single copy genes / Terje Raudsepp and Bhanu P. Chowdhary -- Construction of radiation hybrid panels / John E. Page and William J. Murphy -- Survey sequencing and radiation hybrid mapping to construct comparative maps / Christophe Hitte [and others] -- Construction of high-resolution comparative maps in mammals using BAC-end sequences / Denis M. Larkin and Harris A. Lewin -- Amniote phylogenomics : testing evolutionary hypotheses with BAC library scanning and targeted clone analysis of large-scale sequences from reptiles / Andrew M. Shedlock, Daniel E. Janes, and Scott V. Edwards -- Comparative physical mapping : universal overgo hybridization probe design and BAC library hybridization / James W. Thomas -- Phylogenomic resources at the UCSC Genome Browser / Kate Rosenbloom [and others] -- Computational tools for the analysis of rearrangements in mammalian genomes / Glenn Tesler and Guillaume Bourque -- Computational reconstruction of ancestral DNA sequences / Mathieu Blanchette [and others] -- Sequencing and phylogenomic analysis of whole mitochondrial genomes of animals / Rafael Zardoya and Mónica Suárez -- Retroposons : genetic footrpints on the evolutionary paths of life / Hidenori Nishihara and Norihiro Okada -- LINE-1 elements : analysis by FISH and nucleotide sequences / Paul D. Waters [and others] -- Identification of cryptic sex chromosomes and isolation of X- and Y-borne genes / Paul D. Waters [and others].
Action note: digitized 2011 committed to preserveSummary: The past decade has seen the emergence of a new field of scientific inquiry at the intersection of phylogenetics and genomics - phylogenomics. This collection of protocols and resources describes many of the molecular methods and bioinformatics tools that have brought this field to fruition.
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Includes bibliographical references and index.

From gene-scale to genome-scale phylogenetics : the data flood in, but the challenges remain / Antonis Rokas and Stylianos Chatzimanolis -- Phylogenomic analysis of chromosome sorting and painting / Roscoe Stanyon and Gary Stone -- FISH for mapping single copy genes / Terje Raudsepp and Bhanu P. Chowdhary -- Construction of radiation hybrid panels / John E. Page and William J. Murphy -- Survey sequencing and radiation hybrid mapping to construct comparative maps / Christophe Hitte [and others] -- Construction of high-resolution comparative maps in mammals using BAC-end sequences / Denis M. Larkin and Harris A. Lewin -- Amniote phylogenomics : testing evolutionary hypotheses with BAC library scanning and targeted clone analysis of large-scale sequences from reptiles / Andrew M. Shedlock, Daniel E. Janes, and Scott V. Edwards -- Comparative physical mapping : universal overgo hybridization probe design and BAC library hybridization / James W. Thomas -- Phylogenomic resources at the UCSC Genome Browser / Kate Rosenbloom [and others] -- Computational tools for the analysis of rearrangements in mammalian genomes / Glenn Tesler and Guillaume Bourque -- Computational reconstruction of ancestral DNA sequences / Mathieu Blanchette [and others] -- Sequencing and phylogenomic analysis of whole mitochondrial genomes of animals / Rafael Zardoya and Mónica Suárez -- Retroposons : genetic footrpints on the evolutionary paths of life / Hidenori Nishihara and Norihiro Okada -- LINE-1 elements : analysis by FISH and nucleotide sequences / Paul D. Waters [and others] -- Identification of cryptic sex chromosomes and isolation of X- and Y-borne genes / Paul D. Waters [and others].

Print version record.

The past decade has seen the emergence of a new field of scientific inquiry at the intersection of phylogenetics and genomics - phylogenomics. This collection of protocols and resources describes many of the molecular methods and bioinformatics tools that have brought this field to fruition.

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Electronic reproduction. [Place of publication not identified] : HathiTrust Digital Library, 2011. MiAaHDL

Master and use copy. Digital master created according to Benchmark for Faithful Digital Reproductions of Monographs and Serials, Version 1. Digital Library Federation, December 2002. MiAaHDL

http://purl.oclc.org/DLF/benchrepro0212

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English.

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