Cancer gene profiling : methods and protocols / edited by Robert Grützmann and Christian Pilarsky.

Contributor(s): Grützmann, Robert | Pilarsky, Christian
Material type: TextTextSeries: Springer protocols (Series): ; Methods in molecular biology (Clifton, N.J.): v. 576.Publisher: New York, N.Y. : Humana Press, ©2010Description: 1 online resource (xi, 450 pages) : illustrationsContent type: text Media type: computer Carrier type: online resourceISBN: 1597455458; 9781597455459Subject(s): Cancer genes | DNA microarrays | Laboratory Manuals | Microarray Analysis | Neoplasms | Genetics | Methods | Publication Formats | Biology | Microchip Analytical Procedures | Investigative Techniques | Disease | Genetic Techniques | Chemistry Techniques, Analytical | Biological Science Disciplines | Analytical, Diagnostic and Therapeutic Techniques and Equipment | Publication Characteristics | Natural Science Disciplines | Disciplines and Occupations | Gene Expression Profiling | Cancer genes | DNA microarrays | Oncology | Medicine | Health & Biological Sciences | neoplasms | genen | genes | dna sequencing | laboratoriummethoden | laboratory methods | protocollen | protocols | Cellular Biology | CelbiologieGenre/Form: Electronic books. Additional physical formats: Print version:: Cancer gene profiling.DDC classification: 616.99/4042 LOC classification: RC268.4Online resources: Click here to access online
Contents:
Organizational issues in providing high-quality human tissues and clinical information for the support of biomedical research / Walter C. Bell, Katherine C. Sexton, and William E. Grizzle -- Manual microdissection / Glen Kristiansen -- Laser microdissection / Anja Rabien -- Tissue microarrays / Ana-Maria Dancau [and others] -- A decade of cancer gene profiling : from molecular portraits to molecular function / Henri Sara, Olli Kallioniemi, and Matthias Nees -- Mining expressed sequence tag (EST) libraries for cancer-associated genes / Armin O. Schmitt -- Automated fluorescent differential display for cancer gene profiling / Jonathan D. Meade [and others] -- Manual microdissection combined with antisense RNA-longSAGE for the analysis of limited cell numbers / Jutta Lüttges, Stephan A. Hahn, and Anna M. Heidenblut -- Quantitative DNA methylation profiling on a high-density oligonucleotide microarray / Anne Fassbender [and others] -- Single-nucleotide polymorphism (SNP) analysis to associate cancer risk / Julie Earl and William Greenhalf -- Application of proteomics in cancer gene profiling : two-dimensional difference in gel electrophoresis (2D-DIGE) / Deepak Hariharan, Mark E. Weeks, and Tatjana Crnogorac-Jurcevic -- Search for and identification of novel tumor-associated autoantigens / Karsten Conrad [and others] -- Integrative oncogenomic analysis of microarray data in hematologic malignancies / Jose A. Martínez-Climent [and others] -- Cancer gene profiling in pancreatic cancer / Felip Vilardell and Christine A. Iacobuzio-Donahue -- Cancer gene profiling in prostate cancer / Adam Foye and Phillip G. Febbo -- Cancer gene profiling for response prediction / B. Michael Ghadimi and Marian Grade -- The EGFR pathway as an example for genotype : phenotype correlation in tumor genes / Ulrike Mogck, Eray Goekkurt, and Jan Stoehlmacher -- Quantitation of CD39 gene expression in pancreatic tissue by real-time polymerase chain reaction / Martin Loos, Beat Künzli, nad Helmut Friess -- Functional profiling methods in cancer / Joaquín Dopazo -- Calibration of microarray gene-expression data / Hans Binder, Stephan Preibisch, and Hilmar Berger -- Meta-analysis of cancer gene-profiling data / Xinan Yang and Xiao Sun -- Target gene discovery for novel therapeutic agents in cancer treatment / Ole Ammerpohl, Sanjay Tiwari, and Holger Kalthoff.
Summary: Over the last few years, the methods for analyzing cancer-related genes on a molecular level have changed rapidly. The advent of incredible new technology, such as automated sequencing, has served as a catalyst for many advances in the area of gene profiling, and has enabled the research community to investigate populations of cells in a given tissue. Cancer Gene Profiling: Methods and Protocols examines the world of cancer gene profiling in light of these new advances, providing highly developed microarray techniques alongside modern methods for arraying tissues and proteomics. Chapters bring together the experiences of leading scientists in each method of profiling, providing a clear overview of the ground-breaking techniques used to perform these experiments effectively. Composed in the highly successful Methods in Molecular Biology series format, each chapter contains a brief introduction, step-by-step methods, a list of necessary materials, and a Notes section which shares tips on troubleshooting and avoiding known pitfalls. Comprehensive and state-of-the-art, Cancer Gene Profiling: Methods and Protocols is a fundamental guidebook for researchers in the field of cancer gene profiling, as well as for those individuals in the area of biomedical/translational research.
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Organizational issues in providing high-quality human tissues and clinical information for the support of biomedical research / Walter C. Bell, Katherine C. Sexton, and William E. Grizzle -- Manual microdissection / Glen Kristiansen -- Laser microdissection / Anja Rabien -- Tissue microarrays / Ana-Maria Dancau [and others] -- A decade of cancer gene profiling : from molecular portraits to molecular function / Henri Sara, Olli Kallioniemi, and Matthias Nees -- Mining expressed sequence tag (EST) libraries for cancer-associated genes / Armin O. Schmitt -- Automated fluorescent differential display for cancer gene profiling / Jonathan D. Meade [and others] -- Manual microdissection combined with antisense RNA-longSAGE for the analysis of limited cell numbers / Jutta Lüttges, Stephan A. Hahn, and Anna M. Heidenblut -- Quantitative DNA methylation profiling on a high-density oligonucleotide microarray / Anne Fassbender [and others] -- Single-nucleotide polymorphism (SNP) analysis to associate cancer risk / Julie Earl and William Greenhalf -- Application of proteomics in cancer gene profiling : two-dimensional difference in gel electrophoresis (2D-DIGE) / Deepak Hariharan, Mark E. Weeks, and Tatjana Crnogorac-Jurcevic -- Search for and identification of novel tumor-associated autoantigens / Karsten Conrad [and others] -- Integrative oncogenomic analysis of microarray data in hematologic malignancies / Jose A. Martínez-Climent [and others] -- Cancer gene profiling in pancreatic cancer / Felip Vilardell and Christine A. Iacobuzio-Donahue -- Cancer gene profiling in prostate cancer / Adam Foye and Phillip G. Febbo -- Cancer gene profiling for response prediction / B. Michael Ghadimi and Marian Grade -- The EGFR pathway as an example for genotype : phenotype correlation in tumor genes / Ulrike Mogck, Eray Goekkurt, and Jan Stoehlmacher -- Quantitation of CD39 gene expression in pancreatic tissue by real-time polymerase chain reaction / Martin Loos, Beat Künzli, nad Helmut Friess -- Functional profiling methods in cancer / Joaquín Dopazo -- Calibration of microarray gene-expression data / Hans Binder, Stephan Preibisch, and Hilmar Berger -- Meta-analysis of cancer gene-profiling data / Xinan Yang and Xiao Sun -- Target gene discovery for novel therapeutic agents in cancer treatment / Ole Ammerpohl, Sanjay Tiwari, and Holger Kalthoff.

Includes bibliographical references and index.

Print version record.

Over the last few years, the methods for analyzing cancer-related genes on a molecular level have changed rapidly. The advent of incredible new technology, such as automated sequencing, has served as a catalyst for many advances in the area of gene profiling, and has enabled the research community to investigate populations of cells in a given tissue. Cancer Gene Profiling: Methods and Protocols examines the world of cancer gene profiling in light of these new advances, providing highly developed microarray techniques alongside modern methods for arraying tissues and proteomics. Chapters bring together the experiences of leading scientists in each method of profiling, providing a clear overview of the ground-breaking techniques used to perform these experiments effectively. Composed in the highly successful Methods in Molecular Biology series format, each chapter contains a brief introduction, step-by-step methods, a list of necessary materials, and a Notes section which shares tips on troubleshooting and avoiding known pitfalls. Comprehensive and state-of-the-art, Cancer Gene Profiling: Methods and Protocols is a fundamental guidebook for researchers in the field of cancer gene profiling, as well as for those individuals in the area of biomedical/translational research.

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Cancer gene profiling : ©2016
Cancer gene profiling : ©2016

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